H2N2V1, 1968, Analysis, bibRecord, 000051

Genetic Analysis of Avian Influenza Viruses: Cocirculation of Avian Influenza Viruses with Allele A and B Nonstructural Gene in Northern Pintail (Anas acuta) Ducks Wintering in Japan

Identifieur interne : 000051 ( 1968/Analysis ); précédent : 000050; suivant : 000052

Genetic Analysis of Avian Influenza Viruses: Cocirculation of Avian Influenza Viruses with Allele A and B Nonstructural Gene in Northern Pintail (Anas acuta) Ducks Wintering in Japan

Auteurs : Alam Jahangir [Japon, Bangladesh] ; Sakchai Ruenphet [Japon] ; Nadia Sultana [Japon] ; Dany Shoham [Japon, Israël] ; Kazuaki Takehara [Japon]

Source :

Influenza Research and Treatment [ 2090-1380 ] ; 2012.

RBID : PMC:3540751

Abstract

The pandemic influenza virus strains of 1918 (H1N1), 1957 (H2N2), 1968 (H3N2), and 2009 (H1N1) have genes related to avian influenza viruses (AIVs). The nonstructural (NS) gene of AIVs plays a significant role in host-viral interaction. However, little is known about the degree of diversity of this gene in Northern pintail (Anas acuta) ducks wintering in Japan. This study describes characteristics of pintail-originated H1N1, H1N2, H1N3, H5N2, H5N3, H5N9, and H7N7 viruses. Most of the viruses were revealed to be avian strains and not related to pandemic and seasonal flu strains. Nevertheless, the NP genes of 62.5% (5/8) viruses were found closely related to a A/swine/Korea/C12/08, indicating exchange of genetic material and ongoing mammalian-linked evolution of AIVs. Besides, all the viruses, except Aomori/422/07 H1N1, contain PSIQSR∗GLF motif usually found in avian, porcine, and human H1 strains. The Aomori/422/07 H1N1 has a PSVQSR∗GLF motif identical to a North American strain. This findings linked to an important intercontinental, Asian-American biogeographical interface. Phylogenetically all the viruses were clustered in Eurasian lineage. Cocirculation of allele A and B (NS gene) viruses was evident in the study implying the existence of a wide reservoir of influenza A viruses in pintail wintering in Japan.

Url:

http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3540751

DOI: 10.1155/2012/847505
PubMed: 23320157
PubMed Central: 3540751

Affiliations:

Links to Exploration step

PMC:3540751

Le document en format XML

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<front><div type="abstract" xml:lang="en"><p>The pandemic influenza virus strains of 1918 (H1N1), 1957 (H2N2), 1968 (H3N2), and 2009 (H1N1) have genes related to avian influenza viruses (AIVs). The nonstructural (NS) gene of AIVs plays a significant role in host-viral interaction. However, little is known about the degree of diversity of this gene in Northern pintail (<italic>Anas acuta</italic>
) ducks wintering in Japan. This study describes characteristics of pintail-originated H1N1, H1N2, H1N3, H5N2, H5N3, H5N9, and H7N7 viruses. Most of the viruses were revealed to be avian strains and not related to pandemic and seasonal flu strains. Nevertheless, the NP genes of 62.5% (5/8) viruses were found closely related to a A/swine/Korea/C12/08, indicating exchange of genetic material and ongoing mammalian-linked evolution of AIVs. Besides, all the viruses, except Aomori/422/07 H1N1, contain PSIQSR∗GLF motif usually found in avian, porcine, and human H1 strains. The Aomori/422/07 H1N1 has a PSVQSR∗GLF motif identical to a North American strain. This findings linked to an important intercontinental, Asian-American biogeographical interface. Phylogenetically all the viruses were clustered in Eurasian lineage. Cocirculation of allele A and B (NS gene) viruses was evident in the study implying the existence of a wide reservoir of influenza A viruses in pintail wintering in Japan.</p>
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<author><name sortKey="Ji, K" uniqKey="Ji K">K Ji</name>
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<author><name sortKey="Chen, J" uniqKey="Chen J">J Chen</name>
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<author><name sortKey="Schultz, U" uniqKey="Schultz U">U Schultz</name>
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<author><name sortKey="Mandler, J" uniqKey="Mandler J">J Mandler</name>
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<author><name sortKey="Fitch, Wm" uniqKey="Fitch W">WM Fitch</name>
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<author><name sortKey="Scholtissek, C" uniqKey="Scholtissek C">C Scholtissek</name>
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<author><name sortKey="Shi, J" uniqKey="Shi J">J Shi</name>
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<author><name sortKey="Shoham, D" uniqKey="Shoham D">D Shoham</name>
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<author><name sortKey="Okamura, M" uniqKey="Okamura M">M Okamura</name>
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<author><name sortKey="Nakamaura, M" uniqKey="Nakamaura M">M Nakamaura</name>
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<author><name sortKey="Takehara, K" uniqKey="Takehara K">K Takehara</name>
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<author><name sortKey="Ito, T" uniqKey="Ito T">T Ito</name>
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<author><name sortKey="Campitelli, L" uniqKey="Campitelli L">L Campitelli</name>
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<author><name sortKey="Fan, Xh" uniqKey="Fan X">XH Fan</name>
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<author><name sortKey="Gyarmati, P" uniqKey="Gyarmati P">P Gyarmati</name>
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<author><name sortKey="Sahlin, S" uniqKey="Sahlin S">S Sahlin</name>
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<author><name sortKey="Thanh, Tt" uniqKey="Thanh T">TT Thanh</name>
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<author><name sortKey="Khanh, Th" uniqKey="Khanh T">TH Khanh</name>
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<author><name sortKey="Small, I" uniqKey="Small I">I Small</name>
</author>
<author><name sortKey="Smith, J" uniqKey="Smith J">J Smith</name>
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<author><name sortKey="Suter, P" uniqKey="Suter P">P Suter</name>
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<author><name sortKey="Dutkowski, R" uniqKey="Dutkowski R">R Dutkowski</name>
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<biblStruct><analytic><author><name sortKey="Zhu, Q" uniqKey="Zhu Q">Q Zhu</name>
</author>
<author><name sortKey="Yang, H" uniqKey="Yang H">H Yang</name>
</author>
<author><name sortKey="Chen, W" uniqKey="Chen W">W Chen</name>
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<biblStruct><analytic><author><name sortKey="Obenauar, Jc" uniqKey="Obenauar J">JC Obenauar</name>
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<author><name sortKey="Denson, J" uniqKey="Denson J">J Denson</name>
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<author><name sortKey="Mehta, Pk" uniqKey="Mehta P">PK Mehta</name>
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</div1>
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<affiliations><list><country><li>Bangladesh</li>
<li>Israël</li>
<li>Japon</li>
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<region><li>Région de Kantō</li>
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<name sortKey="Shoham, Dany" sort="Shoham, Dany" uniqKey="Shoham D" first="Dany" last="Shoham">Dany Shoham</name>
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<name sortKey="Takehara, Kazuaki" sort="Takehara, Kazuaki" uniqKey="Takehara K" first="Kazuaki" last="Takehara">Kazuaki Takehara</name>
<name sortKey="Takehara, Kazuaki" sort="Takehara, Kazuaki" uniqKey="Takehara K" first="Kazuaki" last="Takehara">Kazuaki Takehara</name>
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</record>

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   |wiki=    Sante
   |area=    H2N2V1
   |flux=    1968
   |étape=   Analysis
   |type=    RBID
   |clé=     PMC:3540751
   |texte=   Genetic Analysis of Avian Influenza Viruses: Cocirculation of Avian Influenza Viruses with Allele A and B Nonstructural Gene in Northern Pintail (Anas acuta) Ducks Wintering in Japan
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Genetic Analysis of Avian Influenza Viruses: Cocirculation of Avian Influenza Viruses with Allele A and B Nonstructural Gene in Northern Pintail (Anas acuta) Ducks Wintering in Japan

Genetic Analysis of Avian Influenza Viruses: Cocirculation of Avian Influenza Viruses with Allele A and B Nonstructural Gene in Northern Pintail (Anas acuta) Ducks Wintering in Japan

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